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tag gut bacteria genetics genomics ecology

bacteria and DNA molecules on a purple background.
Engineering the Microbiome: CRISPR Leads the Way
Mariella Bodemeier Loayza Careaga, PhD | Mar 15, 2024 | 10+ min read
Scientists have genetically modified isolated microbes for decades. Now, using CRISPR, they intend to target entire microbiomes.
A tubifer cardinalfish
Genome Spotlight: Tubifer cardinalfish (Siphamia tubifer)
Christie Wilcox, PhD | Apr 28, 2022 | 3 min read
These tiny reef fish harbor luminous bacteria, and the chromosome-level assembly of the species’ genome may facilitate the duo’s use as a vertebrate model for symbiosis.
Haydeh Payami is wearing a purple dress and an orange and pink scarf and standing in front of a whiteboard.
A Microbial Link to Parkinson’s Disease
Mariella Bodemeier Loayza Careaga, PhD | Dec 4, 2023 | 6 min read
Haydeh Payami helped uncover the genetic basis of Parkinson’s disease. Now, she hopes to find new ways to treat the disease by studying the gut microbiome.
An illustration of green bacteria floating above neutral-colored intestinal villi
The Inside Guide: The Gut Microbiome’s Role in Host Evolution
Catherine Offord | Jul 1, 2021 | 10+ min read
Bacteria that live in the digestive tracts of animals may influence the adaptive trajectories of their hosts.
Cow image
Slideshow: Examples of Eukaryotic Horizontal Gene Transfer
Christie Wilcox, PhD | Jul 5, 2022 | 4 min read
Horizontally transferred genes play significant roles in eukaryotic genomes
a microscope image of a rotifer
Bacterial Enzyme Keeps Rotifers’ Transposable Elements in Check
Christie Wilcox, PhD | Mar 3, 2022 | 5 min read
Jumping genes in bdelloid rotifers are tamped down by DNA methylation performed by an enzyme pilfered from bacteria roughly 60 million years ago, a study finds.
major depressive disorder depression microbiome bacteria virus phage bacteriophage metabolite metabolomics
Distinct Microbiome and Metabolites Linked with Depression
Rachael Moeller Gorman | Dec 9, 2020 | 4 min read
The gastrointestinal tracts of people with major depressive disorder harbor a signature composition of viruses, bacteria, and their metabolic products, according to the most comprehensive genomic and metabolomic analysis in depression to date.
Hawaiian Bobtail squid
Symbiotic Organs: Extreme Intimacy with the Microbial World
Catherine Offord | Oct 3, 2022 | 10+ min read
All multicellular creatures interact with bacteria, but some have taken the relationship to another level with highly specialized structures that house, feed, and exploit the tiny organisms.
Landscape illustration
Horizontal Gene Transfer Happens More Often Than Anyone Thought
Christie Wilcox, PhD | Jul 5, 2022 | 10+ min read
DNA passed to and from all kinds of organisms, even across kingdoms, has helped shape the tree of life, to a large and undisputed degree in microbes and also unexpectedly in multicellular fungi, plants, and animals.
Bacteria show their smarts?
Alla Katsnelson | May 7, 2008 | 2 min read
Microbes may have the capacity for a type of learning generally attributed to higher organisms, suggests a linkurl:paper;http://www.sciencemag.org/cgi/content/abstract/1154456 published online in Science today (May 8). "We have to start to think about bacterial behavior in a more sophisticated way," said linkurl:Saeed Tavazoie;http://genomics.princeton.edu/tavazoie/web/homes.html of Princeton University, who led the study. Researchers have long assumed that microbes respond to changes in the

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