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tag encode microbiology culture ecology

bacteria and DNA molecules on a purple background.
Engineering the Microbiome: CRISPR Leads the Way
Mariella Bodemeier Loayza Careaga, PhD | Mar 15, 2024 | 10+ min read
Scientists have genetically modified isolated microbes for decades. Now, using CRISPR, they intend to target entire microbiomes.
Settlement Signal
Abby Olena, PhD | Jan 9, 2014 | 3 min read
A marine bacterium generates contractile structures that are essential for the metamorphosis of a tubeworm.
A scanning electron micrograph of a coculture of E. coli and Acinetobacter baylyi. Nanotubes can be seen extending from the E. coli.
What’s the Deal with Bacterial Nanotubes?
Sruthi S. Balakrishnan | Jun 1, 2021 | 10+ min read
Several labs have reported the formation of bacterial nanotubes under different, often contrasting conditions. What are these structures and why are they so hard to reproduce?
Opinion: Constrain Speculation to Protect the Integrity of Science
Mike Klymkowsky | Jun 18, 2018 | 4 min read
What we can know about biology before the last universal common ancestor is limited—and we should be circumspect in filling in the gaps.
Bacteria Harbor Geometric “Organelles”
Amber Dance | Dec 1, 2018 | 10+ min read
Microbes, traditionally thought to lack organelles, get a metabolic boost from geometric compartments that act as cauldrons for chemical reactions. Bioengineers are eager to harness the compartments for their own purposes.
When Stop Means Go
Ruth Williams | May 22, 2014 | 3 min read
A survey of trillions of base pairs of microbial DNA reveals a considerable degree of stop codon reassignment.
Archaea Family Tree Blossoms, Thanks to Genomics
Amber Dance | Jun 1, 2018 | 10+ min read
Identification of new archaea species elucidates the domain’s unique  biology and sheds light on its relationship to eukaryotes.
Discovering Novel Antibiotics
Sandeep Ravindran | Feb 1, 2017 | 7 min read
Three methods identify and activate silent bacterial gene clusters to uncover new drugs
Similar Data, Different Conclusions
Ashley P. Taylor | Feb 23, 2016 | 6 min read
By tweaking certain conditions of a long-running experiment on E. coli, scientists found that some bacteria could be prompted to express a mutant phenotype sooner, without the “generation of new genetic information.” The resulting debate—whether the data support evolutionary theory—is more about semantics than science.
Becoming Acculturated
Jeffrey M. Perkel | May 1, 2016 | 8 min read
Techniques for deep dives into the microbial dark matter

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