New Genome Resource

Members of the Personal Genome Project have created software aimed at helping researchers tease apart genetic differences between individuals.

By | July 11, 2012

image: New Genome Resource Bootstrap DNA by Charles Jencks, in Kew Gardens, U.K.Flickr Creative Commons, mira66

Bootstrap DNA by Charles Jencks, in Kew Gardens, U.K.FLICKR CREATIVE COMMONS, MIRA66

George Church, a sequencing pioneer now at Harvard Medical School and the founder of the Personal Genome Project (PGP), and colleagues have published a new resource to help researchers compare gene variants across individuals this week in the Proceeding of the National Academy of Sciences.

The project stems from work contributed by a number of collaborating institutions around the world to help interpret the gene variants found in the first 10 whole genomes sequenced for the PGP project, which plans to make personal genome sequencing more informative and accessible. Named Genome-Environment-Trait Evidence, or GET-Evidence, the software will help researchers identify previously unrecognized variants, and learn about the environmental factors that mayaffect them.

In the long run, PGP plans to recruit as many as 100,000 individuals, and by this past May, already had some 1,800 enrolled, reported GenomeWeb. The participants agree to waive their genetic privacy and release tissue samples that are made into cell lines placed in a repository for researchers to access. Already the team has found an average of 3.2 million variants per person, which will be churned through the GET-Evidence software to identify the variants most relevant to disease.

"Such integrated data means the PGP can provide common ground for many types of genome research," the authors write in the article.


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