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by Christopher Thorpe

RESEARCH ROUND-UP

BLAST off
A G4 Macintosh computer can run an Apple-optimized version of BLAST up to five-fold faster than previous processors.

Email: Christopher Thorpe - Christopher.Thorpe@cursci.co.uk
News from The Scientist 2002, 3(1):20020201-01

Published 1 February 2002

Molecular biologists using Apple computers can receive a speed boost if they use an optimized version of BLAST and the new Mac operating system OS X on a Macintosh G4. The new version of BLAST, called A/G BLAST, was engineered by Apple's Advanced Computation Group in conjunction with Genentech and was announced on 29 January at the O'Reilly Bioinformatics Technology Conference in Tucson Arizona. A/G BLAST is optimized to take advantage of the G4 processor's Altivec or 'Velocity Engine' components to substantially increase the speed and efficiency of running BLAST queries.


 

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