Mapping the Human Proteome

A comprehensive map of human proteins throughout the body identifies the testes as home to the most unique blend of gene products.

Written byJef Akst
| 2 min read

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FLICKR, KYLE MCDONALDThe Human Protein Atlas (HPA) Program, a nearly decade-long project led by Mathias Uhlén of the Royal Institute of Technology, in Stockholm, this week published 13 million “maps” of human proteins throughout the body. Each map is a visual representation of what proteins are found in which tissues, generated using fluorescently labeled antibodies to some 17,000 of 20,000 known proteins.

“After [the human] genome was mapped 10 years ago, the logical step was to map proteins and figure out where in the human body they are present,” Sanjay Navani, the India site director for HPA, told DNA India. “Forty-eight normal and 20 cancer-based tissues of close to 300 Swedes were extracted from different human organs and stained with [rabbit-produced] antibodies,” he explained, and more than 10 million images of such tissues were taken and studied.

The team has 3,000 more proteins left to map, but the project is already yielding interesting results, the collaborators said. For example, 2,355 of our proteins are expressed in specific organs only. Of all the tissues and organs examined, the testicles get the prize for producing the most unique proteins, ...

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  • Jef (an unusual nickname for Jennifer) got her master’s degree from Indiana University in April 2009 studying the mating behavior of seahorses. After four years of diving off the Gulf Coast of Tampa and performing behavioral experiments at the Tennessee Aquarium in Chattanooga, she left research to pursue a career in science writing. As The Scientist's managing editor, Jef edited features and oversaw the production of the TS Digest and quarterly print magazine. In 2022, her feature on uterus transplantation earned first place in the trade category of the Awards for Excellence in Health Care Journalism. She is a member of the National Association of Science Writers.

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