MIAME begets MAGE

Improved data format debuts but universal microarray repositories still on the horizon.

| 2 min read

Register for free to listen to this article
Listen with Speechify
0:00
2:00
Share

In the absence of a standard format for storing microarray information, people— oftentimes within the same institution—find it difficult to use the millions of data points accumulating in the several microarray repositories extant today. Since its inception in 1999, the Microarray Gene Expression Data Society (MGED) has been working to solve this problem, and the group put forth its latest attempt, MAGE-ML, in the 23 August issue of Genome Biology, (a publication of The Scientist's partner, BioMed Central).

MAGE-ML (Microarray Gene Expression Mark-up Language) follows on the heels of an earlier MGED-devised standard, MIAME (Minimum Information About a Microarray Experiment), which defined for users what information is needed to facilitate data sharing. MAGE-ML provides a framework for moving and storing microarray data sets that incorporates the principles set down in MIAME, bringing the field one step closer to having universally usable public repositories.

The difficulty with microarray experiments goes beyond ...

Interested in reading more?

Become a Member of

The Scientist Logo
Receive full access to more than 35 years of archives, as well as TS Digest, digital editions of The Scientist, feature stories, and much more!
Already a member? Login Here

Meet the Author

  • Laura Defrancesco

    This person does not yet have a bio.
Share
Image of a woman in a microbiology lab whose hair is caught on fire from a Bunsen burner.
April 1, 2025, Issue 1

Bunsen Burners and Bad Hair Days

Lab safety rules dictate that one must tie back long hair. Rosemarie Hansen learned the hard way when an open flame turned her locks into a lesson.

View this Issue
Conceptual image of biochemical laboratory sample preparation showing glassware and chemical formulas in the foreground and a scientist holding a pipette in the background.

Taking the Guesswork Out of Quality Control Standards

sartorius logo
An illustration of PFAS bubbles in front of a blue sky with clouds.

PFAS: The Forever Chemicals

sartorius logo
Unlocking the Unattainable in Gene Construction

Unlocking the Unattainable in Gene Construction

dna-script-primarylogo-digital
Concept illustration of acoustic waves and ripples.

Comparing Analytical Solutions for High-Throughput Drug Discovery

sciex

Products

Atelerix

Atelerix signs exclusive agreement with MineBio to establish distribution channel for non-cryogenic cell preservation solutions in China

Green Cooling

Thermo Scientific™ Centrifuges with GreenCool Technology

Thermo Fisher Logo
Singleron Avatar

Singleron Biotechnologies and Hamilton Bonaduz AG Announce the Launch of Tensor to Advance Single Cell Sequencing Automation

Zymo Research Logo

Zymo Research Launches Research Grant to Empower Mapping the RNome