Zooming in on micrometastases

Researchers have developed an optimized procedure for analyzing the genome and transcriptome of single tumour cells.

Jonathan Weitzman(jonathanweitzman@hotmail.com)
Apr 9, 2002

Micrometastases of disseminated tumour cells present a threat to the long-term survival of cancer patients. Analysis of these rare, lone disseminated cells requires an amplification procedure. In the April Nature Biotechnology, Christoph Klein and colleagues at the University of Munich in Germany report a PCR-based method for analyzing the transcriptome and genome of individual micrometastatic cells (Nat Biotechnol 2002, 20:387-392).

Klein et al. used an antibody against a tumor-specific cell-adhesion molecule to immunoaffnity purify cancer cells from patient bone marrow and isolated genomic DNA and mRNA from individual tumour cells. They then performed a sensitive comparative genomic hybridization and optimized an amplification procedure to generate sufficient cDNA for microarray analysis.

They were able to detect several genes implicated in cell-cycle regulation, cytoskeletal organization and cell adhesion or motility. Among these they found high expression of EMMPRIN, which encodes a protein involved in regulating extracellular matrix degradation...

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