Biology by the Numbers

When the graduate students and postdocs in Martin Wilson's lab at the University of California, Davis, need to do image processing, they look to an unlikely source.

Written byJeffrey Perkel
| 6 min read

Register for free to listen to this article
Listen with Speechify
0:00
6:00
Share

When the graduate students and postdocs in Martin Wilson's lab at the University of California, Davis, need to do image processing, they look to an unlikely source. Instead of off-the-shelf image analysis software, Wilson's team, which studies synapses in the retina, uses home-brewed algorithms running within the mathematical package Matlab, from The Mathworks, Inc., in Natick, Mass.

"Whenever we get images, we apply these routines that we've written to the images to massage the data, improve the signal-to-noise ratio, to do the things to get quantitative images that can tell us something interesting," says Wilson, a professor of neurobiology, physiology, and behavior.

They can do that, because Matlab isn't so much a program as it is a programming language, like Perl or C. The advantage of using such languages, says Kristen Amuzzini, biotech and pharmaceutical marketing manager at The Mathworks, is that programmers need not "reinvent the wheel" to implement ...

Interested in reading more?

Become a Member of

The Scientist Logo
Receive full access to digital editions of The Scientist, as well as TS Digest, feature stories, more than 35 years of archives, and much more!
Already a member? Login Here

Meet the Author

Published In

Share
Image of a woman with her hands across her stomach. She has a look of discomfort on her face. There is a blown up image of her stomach next to her and it has colorful butterflies and gut bacteria all swarming within the gut.
November 2025, Issue 1

Why Do We Feel Butterflies in the Stomach?

These fluttering sensations are the brain’s reaction to certain emotions, which can be amplified or soothed by the gut’s own “bugs".

View this Issue
Olga Anczukow and Ryan Englander discuss how transcriptome splicing affects immune system function in lung cancer.

Long-Read RNA Sequencing Reveals a Regulatory Role for Splicing in Immunotherapy Responses

Pacific Biosciences logo
Research Roundtable: The Evolving World of Spatial Biology

Research Roundtable: The Evolving World of Spatial Biology

Conceptual cartoon image of gene editing technology

Exploring the State of the Art in Gene Editing Techniques

Bio-Rad
Conceptual image of a doctor holding a brain puzzle, representing Alzheimer's disease diagnosis.

Simplifying Early Alzheimer’s Disease Diagnosis with Blood Testing

fujirebio logo

Products

Labvantage Logo

LabVantage Solutions Awarded $22.3 Million U.S Customs and Border Protection Contract to Deliver Next-Generation Forensic LIMS

The Scientist Placeholder Image

Evosep Unveils Open Innovation Initiative to Expand Standardization in Proteomics

OGT logo

OGT expands MRD detection capabilities with new SureSeq Myeloid MRD Plus NGS Panel