360-Degree View of the Tomato

Researchers have sequenced 360 varieties of the tomato plant to create a comprehensive map of the evolution of the fruit from its wild form to the modern varieties.


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The three evolutionary stages of tomatoes. From the left to right: Solanum pimpinellifolium, S. lycopersicum var. cerasiforme and S. lycopersicum.INSTITUTE OF VEGETABLES AND FLOWERS IN THE CHINESE ACADEMY OF AGRICULTURAL SCIENCES, BEIJING, CHINAThe typical red, modern tomato is about one hundred times bigger than its pea-sized wild ancestor, which originally came from the Andes region in South America. To track the long history of tomato breeding and understand how such human-imposed selection has changed the genome of the plant, an international team of researchers, have sequenced 360 tomato plant varieties, including wild and domesticated species. The results are published today (October 12) in Nature Genetics.

“Two years ago we only had one genome and now we have more than 300!” said Harry Klee, a horticultural scientist at the University of Florida who studies tomatoes and was not involved in the current study. “What makes this work really important is that it’s a foundation for future improvements on the tomato. We can now find causative genes for the traits we want. This is going to have a huge impact for tomato breeding very quickly.”

The large-scale effort, led by Sanwen Huang of the Institute of Vegetables and Flowers at the Chinese Academy of Agricultural Sciences in Beijing, China, has uncovered a signature of the modern, processing tomato used to make ketchup, a variant that gives some tomato varieties a pink color, ...

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