This webinar will be hosted live and available on-demand

Thursday, December 14, 2023 
2:30 PM Eastern Time 

Scientists use single cell RNA sequencing (scRNA-seq) to gain insights into cellular heterogeneity within complex tissues. Various technical artifacts can be present in scRNA-seq data and should be assessed before performing downstream analyses. In this Technique Talk, Joshua Campbell will discuss the fundamentals of scRNA-seq analysis and appropriate approaches for handling various challenges.

Learning Objectives

  • Comprehensive quality control for single cell RNA-seq analysis
    • Separation of empty drops from true cells
    • Removal of poor quality cells
    • Doublet detection
    • Ambient RNA estimation
  • Downstream analysis of scRNA-seq data
    • Association with sample-level phenotypes
    • Automated cell labeling
    • Gene set enrichment
    • Cell-cell communication analysis
Joshua Campbell, PhD

Joshua Campbell, PhD
Associate Professor of Medicine
Section of Computational Biomedicine
Boston University Chobanian and Avedisian School of Medicine

Sponsored by