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Genome Digest

What researchers are learning as they sequence, map, and decode species’ genomes

Written byAbby Olena, PhD
| 5 min read

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Female (top) and male half-smooth tongue solesSL CHEN

Species: Half-smooth tongue sole (Cynoglossus semilaevis)
Genome size: 477 million base pairs

In flatfish like the half-smooth tongue sole (Cynoglossus semilaevis), males have two Z chromosomes, while females have a Z and a W. Researchers have sequenced the genomes of both a male and a female tongue sole. The assemblies were published in Nature Genetics this week (February 2).

An international team sequenced one male (ZZ) and one female (ZW) tongue sole separately, annotating 21,516 protein-coding genes. The researchers identified sequences specific to the W chromosome by subtracting the male genome assembly from the female one. They found that transposable elements represented less than 6 percent of the tongue sole genome—much less than other vertebrates. They also compared gene expression before and after metamorphosis, identifying ...

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Meet the Author

  • abby olena

    As a freelancer for The Scientist, Abby reports on new developments in life science for the website. She has a PhD from Vanderbilt University and got her start in science journalism as the Chicago Tribune’s AAAS Mass Media Fellow in 2013. Following a stint as an intern for The Scientist, Abby was a postdoc in science communication at Duke University, where she developed and taught courses to help scientists share their research. In addition to her work as a science journalist, she leads science writing and communication workshops and co-produces a conversational podcast. She is based in Alabama.  

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