Seeing in Numbers

By Arup K. Chakraborty Seeing in Numbers How concepts from physics and engineering are informing questions about T cell selection and antigen recognition. In the fall of 1999, a colleague at Berkeley, Graham Fleming, invited me to lunch with a newly arrived postdoc who was exploring immunology—a new field for him. My research couldn’t have been less related: theoretical problems in polymer physics and catalytic materials. But, one of Graha

Written byArup K. Chakraborty
| 12 min read

Register for free to listen to this article
Listen with Speechify
0:00
12:00
Share

In the fall of 1999, a colleague at Berkeley, Graham Fleming, invited me to lunch with a newly arrived postdoc who was exploring immunology—a new field for him. My research couldn’t have been less related: theoretical problems in polymer physics and catalytic materials. But, one of Graham’s roles was to facilitate interaction between the physical sciences and biology. At 37, I was comfortably ensconced at Berkeley as a tenured full professor, and having no research interest in biology, I went along with a certain measure of skepticism.

The postdoc, Jay Groves, brought with him a paper about the immunological synapse, which is the structured zone of spatially patterned receptors and ligands that forms between a lymphocyte and an antigen-presenting cell (APC) bearing molecular signatures of pathogens. While immunologists previously had x-ray crystallography images showing how some of these proteins interacted individually, this paper visualized how multiple receptors interacted at the ...

Interested in reading more?

Become a Member of

The Scientist Logo
Receive full access to digital editions of The Scientist, as well as TS Digest, feature stories, more than 35 years of archives, and much more!
Already a member? Login Here

Meet the Author

Published In

Share
Image of a woman with her hands across her stomach. She has a look of discomfort on her face. There is a blown up image of her stomach next to her and it has colorful butterflies and gut bacteria all swarming within the gut.
November 2025, Issue 1

Why Do We Feel Butterflies in the Stomach?

These fluttering sensations are the brain’s reaction to certain emotions, which can be amplified or soothed by the gut’s own “bugs".

View this Issue
Olga Anczukow and Ryan Englander discuss how transcriptome splicing affects immune system function in lung cancer.

Long-Read RNA Sequencing Reveals a Regulatory Role for Splicing in Immunotherapy Responses

Pacific Biosciences logo
Research Roundtable: The Evolving World of Spatial Biology

Research Roundtable: The Evolving World of Spatial Biology

Conceptual cartoon image of gene editing technology

Exploring the State of the Art in Gene Editing Techniques

Bio-Rad
Conceptual image of a doctor holding a brain puzzle, representing Alzheimer's disease diagnosis.

Simplifying Early Alzheimer’s Disease Diagnosis with Blood Testing

fujirebio logo

Products

Eppendorf Logo

Research on rewiring neural circuit in fruit flies wins 2025 Eppendorf & Science Prize

Evident Logo

EVIDENT's New FLUOVIEW FV5000 Redefines the Boundaries of Confocal and Multiphoton Imaging

Evident Logo

EVIDENT Launches Sixth Annual Image of the Year Contest

10x Genomics Logo

10x Genomics Launches the Next Generation of Chromium Flex to Empower Scientists to Massively Scale Single Cell Research