ERCC Issues a Call to Arms

Microarray data quality is an issue that has been covered extensively in The Scientist (see, for instance, here and here). The basic issue is this: how reliable are the sometimes-subtle changes in gene expression levels these experiments yield, and how reproducible are they.The External RNA Controls Consortium, an ad-hoc group with approximately 70 members from private, public, and academic organizations formed in 2003, is one of several groups working to address these questions. The Consort

Written byJeff Perkel
| 2 min read

Register for free to listen to this article
Listen with Speechify
0:00
2:00
Share

Microarray data quality is an issue that has been covered extensively in The Scientist (see, for instance, here and here). The basic issue is this: how reliable are the sometimes-subtle changes in gene expression levels these experiments yield, and how reproducible are they.

The External RNA Controls Consortium, an ad-hoc group with approximately 70 members from private, public, and academic organizations formed in 2003, is one of several groups working to address these questions. The Consortium?s goal is to develop a reference set of external RNA control (or ?spike?) transcripts, informatics tools, and procedures that can be used to assess technical performance in gene expression assays like microarrays and quantitative, real-time RT-PCR.

If that sounds boring, it shouldn't: the upshot is greater confidence in gene expression data, not to mention the potential for accelerated regulatory approval of microarray diagnostics and accreditation of testing labs.

Recently the consortium released for comment ...

Interested in reading more?

Become a Member of

The Scientist Logo
Receive full access to more than 35 years of archives, as well as TS Digest, digital editions of The Scientist, feature stories, and much more!
Already a member? Login Here

Meet the Author

Share
Image of a woman with her hands across her stomach. She has a look of discomfort on her face. There is a blown up image of her stomach next to her and it has colorful butterflies and gut bacteria all swarming within the gut.
November 2025, Issue 1

Why Do We Feel Butterflies in the Stomach?

These fluttering sensations are the brain’s reaction to certain emotions, which can be amplified or soothed by the gut’s own “bugs".

View this Issue
Olga Anczukow and Ryan Englander discuss how transcriptome splicing affects immune system function in lung cancer.

Long-Read RNA Sequencing Reveals a Regulatory Role for Splicing in Immunotherapy Responses

Pacific Biosciences logo
Research Roundtable: The Evolving World of Spatial Biology

Research Roundtable: The Evolving World of Spatial Biology

Conceptual cartoon image of gene editing technology

Exploring the State of the Art in Gene Editing Techniques

Bio-Rad
Conceptual image of a doctor holding a brain puzzle, representing Alzheimer's disease diagnosis.

Simplifying Early Alzheimer’s Disease Diagnosis with Blood Testing

fujirebio logo

Products

Eppendorf Logo

Research on rewiring neural circuit in fruit flies wins 2025 Eppendorf & Science Prize

Evident Logo

EVIDENT's New FLUOVIEW FV5000 Redefines the Boundaries of Confocal and Multiphoton Imaging

Evident Logo

EVIDENT Launches Sixth Annual Image of the Year Contest

10x Genomics Logo

10x Genomics Launches the Next Generation of Chromium Flex to Empower Scientists to Massively Scale Single Cell Research