Universal bioinformatics system

I3C hopes to make identifying and tracking genes and proteins easier, and to encourage open-source software in bioinformatics.

Written byPark Paula
| 2 min read

Register for free to listen to this article
Listen with Speechify
0:00
2:00
Share

TORONTO — A consortium of computer companies and academics on 10 June 2002 presented a naming system for life science information that they said could simplify the identification and tracking of genes and proteins.

The Interoperable Informatics Infrastructure Consortium (I3C) demonstrated a universal nomenclature at the Biotechnology Industry Organization (BIO) 2002 Annual Convention. The Life Science Identifier (LSID) defines a simple convention for identifying and accessing biological data stored in multiple formats.

Today, researchers use more than 400 file formats, and each lab has its own system for naming and structuring the data. "[LSID] allows us to identify an object in a database or flat file and assign it a single name," said Brian Gilman, head of the I3C technical architecture working group, one of 1000 exhibitors at the convention. "We're trying to make things as open and transparent as possible."

Gilman, who is also a group leader for informatics ...

Interested in reading more?

Become a Member of

The Scientist Logo
Receive full access to more than 35 years of archives, as well as TS Digest, digital editions of The Scientist, feature stories, and much more!
Already a member? Login Here

Meet the Author

Share
Image of a woman with her hands across her stomach. She has a look of discomfort on her face. There is a blown up image of her stomach next to her and it has colorful butterflies and gut bacteria all swarming within the gut.
November 2025, Issue 1

Why Do We Feel Butterflies in the Stomach?

These fluttering sensations are the brain’s reaction to certain emotions, which can be amplified or soothed by the gut’s own “bugs".

View this Issue
Olga Anczukow and Ryan Englander discuss how transcriptome splicing affects immune system function in lung cancer.

Long-Read RNA Sequencing Reveals a Regulatory Role for Splicing in Immunotherapy Responses

Pacific Biosciences logo
Research Roundtable: The Evolving World of Spatial Biology

Research Roundtable: The Evolving World of Spatial Biology

Conceptual cartoon image of gene editing technology

Exploring the State of the Art in Gene Editing Techniques

Bio-Rad
Conceptual image of a doctor holding a brain puzzle, representing Alzheimer's disease diagnosis.

Simplifying Early Alzheimer’s Disease Diagnosis with Blood Testing

fujirebio logo

Products

Labvantage Logo

LabVantage Solutions Awarded $22.3 Million U.S Customs and Border Protection Contract to Deliver Next-Generation Forensic LIMS

The Scientist Placeholder Image

Evosep Unveils Open Innovation Initiative to Expand Standardization in Proteomics

OGT logo

OGT expands MRD detection capabilities with new SureSeq Myeloid MRD Plus NGS Panel