Zooming in on micrometastases

Researchers have developed an optimized procedure for analyzing the genome and transcriptome of single tumour cells.

Written byJonathan Weitzman
| 1 min read

Register for free to listen to this article
Listen with Speechify
0:00
1:00
Share

Micrometastases of disseminated tumour cells present a threat to the long-term survival of cancer patients. Analysis of these rare, lone disseminated cells requires an amplification procedure. In the April Nature Biotechnology, Christoph Klein and colleagues at the University of Munich in Germany report a PCR-based method for analyzing the transcriptome and genome of individual micrometastatic cells (Nat Biotechnol 2002, 20:387-392).

Klein et al. used an antibody against a tumor-specific cell-adhesion molecule to immunoaffnity purify cancer cells from patient bone marrow and isolated genomic DNA and mRNA from individual tumour cells. They then performed a sensitive comparative genomic hybridization and optimized an amplification procedure to generate sufficient cDNA for microarray analysis.

They were able to detect several genes implicated in cell-cycle regulation, cytoskeletal organization and cell adhesion or motility. Among these they found high expression of EMMPRIN, which encodes a protein involved in regulating extracellular matrix degradation and cell invasion.

The ...

Interested in reading more?

Become a Member of

The Scientist Logo
Receive full access to more than 35 years of archives, as well as TS Digest, digital editions of The Scientist, feature stories, and much more!
Already a member? Login Here

Meet the Author

Share
December digest cover image of a wooden sculpture comprised of multiple wooden neurons that form a seahorse.
December 2025, Issue 1

Wooden Neurons: An Artistic Vision of the Brain

A neurobiologist, who loves the morphology of cells, turns these shapes into works of art made from wood.

View this Issue
Alzheimer: Phosphorylation of Tau proteins leads to disintegration of microtubuli in a neuron axon stock photo

Advancing Alzheimer’s Disease Detection with Brain-Derived pTau217 Assays

Alamar Biosciences logo
Abstract pattern of multicolored circles on a dark background, representing immune cell diversity and single-cell sequencing resolution.

Exploring Immune Diversity at the Single-Cell Level

parse-biosciences-logo
Stacks of cell culture dishes, plates, and flasks with pink cell culture medium on a white background.

Driving Innovation with Cell Culture Essentials

Merck
Stacks of cell culture dishes, plates, and flasks with pink cell culture medium on a white background.

Driving Innovation with Cell Culture Essentials

MilliporeSigma purple logo

Products

Beckman Logo

Beckman Coulter Life Sciences Introduces the Biomek i3 Benchtop Liquid Handler, a Small but Mighty Addition to its Portfolio of Automated Workstations

brandtech logo

BRANDTECH® Scientific Announces Strategic Partnership with Copia Scientific to Strengthen Sales and Service of the BRAND® Liquid Handling Station (LHS) 

Top Innovations 2026 Contest Image

Enter Our 2026 Top Innovations Contest

Biotium Logo

Biotium Expands Tyramide Signal Amplification Portfolio with Brighter and More Stable Dyes for Enhanced Spatial Imaging