Researchers Catalog Earth’s Microbiome

The new database includes data from 27,000 samples collected at sites ranging from Alaskan permafrost to the ocean floor.

Written byKatarina Zimmer
| 5 min read

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ANDRZEJ KRAUZE

We are surrounded by an invisible world of microorganisms—including many species of bacteria, archaea, and fungi—that play fundamental roles in natural processes, from cycling carbon in soil to fermenting food in the mammalian gut. But until recently, there hasn’t been a standardized way of documenting these ubiquitous little organisms, making it difficult to fully understand the extent of their functions on Earth.

In the summer of 2010, 26 leading experts in microbiology and bioinformatics congregated for a workshop in Snowbird, Utah, to discuss the challenges standing in the way of achieving this goal. The trouble, the group concluded, was that while laboratories across the world were rapidly advancing their knowledge of microbes using genetic sequencing, they were going about it in completely different ways, which ...

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Meet the Author

  • katya katarina zimmer

    After a year teaching an algorithm to differentiate between the echolocation calls of different bat species, Katarina decided she was simply too greedy to focus on one field of science and wanted to write about all of them. Following an internship with The Scientist in 2017, she’s been happily freelancing for a number of publications, covering everything from climate change to oncology. Katarina is a news correspondent for The Scientist and contributes occasional features to the magazine. Find her on Twitter @katarinazimmer and read her work on her website.

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