Skip to main content

Lost Colonies

Next-generation sequencing has identified scores of new microorganisms, but getting even abundant bacterial species to grow in the lab has proven challenging.

Written byAnna Azvolinsky
| 14 min read

Register for free to listen to this article
Listen with Speechify
0:00
14:00

TAMING THE BEAST: Colored scanning electron micrograph of a segmented filamentous bacterium (SFB, orange) reaching up from a bed of mouse intestinal cells (green). SFB was successfully cultured for the first time this year, a half a century after it was first discovered.COURTESY OF PAMELA SCHNUPF. NATURE, 520:99-103, 2015.

In 2001, Nicole Dubilier, a marine biologist at the Max Planck Institute for Marine Microbiology in Bremen, Germany, made a surprising discovery—two symbiotic bacterial species living inside a gutless marine worm, Olavius algarvensis. To better understand the unique relationship among the three species, Dubilier set out to culture the two symbionts. But nearly 15 years later, she has yet to successfully grow the bacteria in the lab.

Her best attempt kept the microbes alive for about 10 months, Dubilier says, but then the culture “just died on us. . . . It’s a kamikaze project. How long can you have someone put in all their effort if it’s constantly unsuccessful?”

Dubilier is hardly alone in her plight. A heaping teaspoon of soil or a shot ...

Interested in reading more?

Become a Member of

The Scientist Logo
Receive full access to digital editions of The Scientist, as well as TS Digest, feature stories, more than 35 years of archives, and much more!
Already a member?
Add The Scientist as a preferred source on Google

Add The Scientist as a preferred Google source to see more of our trusted coverage.

Meet the Author

  • head shot of blond woman wearing glasses

    Anna Azvolinsky received a PhD in molecular biology in November 2008 from Princeton University. Her graduate research focused on a genome-wide analyses of genomic integrity and DNA replication. She did a one-year post-doctoral fellowship at Memorial Sloan Kettering Cancer Center in New York City and then left academia to pursue science writing. She has been a freelance science writer since 2012, based in New York City.

    View Full Profile

Related Topics

Published In

Related articles background image
The Scientist Digest cover September 2026
September 2026

Multiplex Microscopy Becomes Easier with Encoded Antibodies

A new system that enables researchers to uniquely tag monoclonal antibodies for use in microscopy could help simplify complex imaging studies.

View this Issue
Rethinking ALS Biomarkers: From Discovery to Clinical Impact

Rethinking ALS Biomarkers: From Discovery to Clinical Impact

Alamar Biosciences logo
Best Practices for qPCR Assay Design and Optimization

Best Practices for qPCR Assay Design and Optimization

Bio-Rad
Beyond the Basics: Strategies for Single-Cell and Spatial Transcriptomics Analysis

Beyond the Basics: Strategies for Single-Cell and Spatial Transcriptomics Analysis

bioxcell
Scientist reviewing cellular and molecular data on a computer in a laboratory.

Building Translation-Ready Biomarkers with Connected Workflows

Danaher Logo

Products

Closeup image of a multi channel pipette dispensing pink liquid into a 96-well plate.

The ASSIST PLUS pipetting robot for affordable workflow automation

Integra Logo
Single cells in suspension

Rapidly isolate primary cells and make uniform single-cell suspensions with Corning® Cell Strainers

Corning logo
Abstract image representing cell membranes linked together.

CellBrite® Steady Membrane Stain: Cell surface staining built for real-time imaging

Biotium
sino biological logo

Monod Bio Licenses AI-designed Protein Technologies to SignalChem Biotech for Custom Discovery Assays