Infographic: The Changing Infant Gut Microbiome

The microbial makeup of a newborn baby’s intestines has changed dramatically over the past 100 years, and we are now beginning to understand how and why this matters.

Written byJennifer T. Smilowitz and Diana Hazard Taft
| 7 min read

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ABOVE: © LAURIE O'KEEFE

Historically, the breastfed infant gut microbiome was a near monoculture of Bifidobacterium. The formula-fed infant gut microbiome was much more diverse. The breastfed infant gut microbiome and the formula-fed infant gut microbiome are now more similar to the historical formula-fed infant gut microbiome, although modern breastfed infants do have more Bifidobacterium than modern formula-fed infants.

Human milk oligosaccharides (HMOs) are complex carbohydrates that microbial species of the milk-oriented microbiome (MOM) can use as a food source. Bifidobacterium infantis encodes many proteins that specifically bind and transport all types of HMOs into its cell and digest them internally. Other Bifidobacterium species digest only some HMOs and some do so externally. Digestion of HMOs by MOM Bifidobacterium results in the production of lactate and the short chain fatty acid acetate, that are secreted into the gut lumen. These molecules lower the pH in the intestinal milieu, which improves ...

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