New Tissue Clearing Methods Offer a Window into the Brain

Researchers are developing a variety of approaches for clearing neural tissue to get a better view of the brain’s circuitry.

Written byAndy Tay
| 7 min read

Register for free to listen to this article
Listen with Speechify
0:00
7:00
Share

ABOVE: © istock.com, FIRSTSIGNAL

The mammalian brain consists of billions of neurons wired together in various circuits, each one involved in specific physiological functions. To better understand how these different neurons and circuits are associated with mental activities and diseases, researchers are reconstructing detailed, three-dimensional maps of neural networks.

However, 3-D imaging of the mammalian brain is challenging. Light scatters as it travels through layers of tissue, dispersed by a variety of molecules such as water, lipids, and proteins. This reduces image resolution.

One way to improve resolution is to reduce the scattering. Researchers achieve this by first removing water and lipids from tissue. Next, chemicals are introduced that have a refractive index—a measure of how much the molecules bend light that passes through them—in the range of that of proteins. Establishing near-homogenous refractive indices in the molecules that populate the tissue environment allows light rays to converge to improve ...

Interested in reading more?

Become a Member of

The Scientist Logo
Receive full access to digital editions of The Scientist, as well as TS Digest, feature stories, more than 35 years of archives, and much more!
Already a member? Login Here

Related Topics

Meet the Author

  • Andy received his PhD from the University of California, Los Angeles, in 2014, focusing on neuromodulation and engineering. He subsequently completed his postdoctoral training at Stanford University, where he developed nanotechnologies for immuno-engineering. Andy is listed as a 2019 Forbes 30 Under 30 (North America, Science) and is a freelance writer based in Singapore.

    View Full Profile

Published In

October 2019

Brain Fog

Air Pollution May Cause Cognitive Decline

Share
Illustration of a developing fetus surrounded by a clear fluid with a subtle yellow tinge, representing amniotic fluid.
January 2026

What Is the Amniotic Fluid Composed of?

The liquid world of fetal development provides a rich source of nutrition and protection tailored to meet the needs of the growing fetus.

View this Issue
Human-Relevant In Vitro Models Enable Predictive Drug Discovery

Advancing Drug Discovery with Complex Human In Vitro Models

Stemcell Technologies
Redefining Immunology Through Advanced Technologies

Redefining Immunology Through Advanced Technologies

Ensuring Regulatory Compliance in AAV Manufacturing with Analytical Ultracentrifugation

Ensuring Regulatory Compliance in AAV Manufacturing with Analytical Ultracentrifugation

Beckman Coulter Logo
Conceptual multicolored vector image of cancer research, depicting various biomedical approaches to cancer therapy

Maximizing Cancer Research Model Systems

bioxcell

Products

Sino Biological Logo

Sino Biological Pioneers Life Sciences Innovation with High-Quality Bioreagents on Inside Business Today with Bill and Guiliana Rancic

Sino Biological Logo

Sino Biological Expands Research Reagent Portfolio to Support Global Nipah Virus Vaccine and Diagnostic Development

Beckman Coulter

Beckman Coulter Life Sciences Partners with Automata to Accelerate AI-Ready Laboratory Automation

Refeyn logo

Refeyn named in the Sunday Times 100 Tech list of the UK’s fastest-growing technology companies