Paused RNA Polymerase Quashes New Initiation of Transcription

Pauses may help cells fine-tune gene expression.

Written byShawna Williams
| 2 min read

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POLYMERASE INTERFERENCE: During gene expression, multiple RNA polymerase II enzymes commonly transcribe a gene simultaneously. But if a polymerase pauses on the gene, no new transcription is initiated until it restarts.
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The paper
W. Shao, J. Zeitlinger, “Paused RNA polymerase II inhibits new transcriptional initiation,” Nat Genet, 49:1045-51, 2017.

When it comes to regulating gene expression, transcriptional initiation tends to get a lot of attention. But it’s become clear in the past decade that RNA polymerase II, the enzyme that transcribes DNA to RNA, frequently pauses after reading just a few dozen base pairs. This break surely affects gene expression rates—though its impact has not been obvious. Julia Zeitlinger and graduate student Wanqing Shao of the Stowers Institute for Medical Research in Kansas City, Missouri, recently found that as long as RNA polymerase remains stalled, very little new transcription is initiated.

Zeitlinger and Shao came to this conclusion by using a drug to freeze RNA polymerase ...

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Meet the Author

  • Shawna was an editor at The Scientist from 2017 through 2022. She holds a bachelor’s degree in biochemistry from Colorado College and a graduate certificate in science communication from the University of California, Santa Cruz. Previously, she worked as a freelance editor and writer, and in the communications offices of several academic research institutions. As news director, Shawna assigned and edited news, opinion, and in-depth feature articles for the website on all aspects of the life sciences. She is based in central Washington State, and is a member of the Northwest Science Writers Association and the National Association of Science Writers.

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