Structure by Feel

Applying the sensitive touch of atomic force microscopy to DNA, cells, and proteins

Written byAmy Maxmen
| 8 min read

Register for free to listen to this article
Listen with Speechify
0:00
8:00
Share

A TOUCHING SIGHT: The tip of an atomic force microscope probe is so small that it allows researchers to topographically map unaltered macromolecules and cells or measure the mechanical properties of biological samples. © MATTHIAS KULKA/CORBISEven powerful light microscopes fail scientists when molecules measure less than 200 nanometers, roughly a thousandth the diameter of an eyelash. However, touch can get a good bit closer than sight. By tapping and stretching molecules as small as a single nanometer, atomic force microscopes (AFM) reveal the topography and mechanical properties of objects or features too small for light or electron microscopes to discriminate.

In contrast to both light and scanning electron microscopy, for AFM the sample need not be dehydrated, labeled with fluorescent tags, or coated in metal before imaging. Therefore, cells, proteins, and DNA can be imaged unaltered. These qualities have won the instrument enthusiastic fans. “AFM is the simplest, most reliable, resilient, and powerful instrument I have ever come across,” says Julio Fernandez, a biophysicist at Columbia University in New York City. “It is spectacularly counterintuitive, because it looks so simple but produces such magnificent science.”

Physicists invented AFM in 1986 as a technique to assess the properties of inorganic matter at the nanoscale. As these tools catch on among cell biologists, commercial manufacturers have begun developing and marketing them to suit biological-science needs, which reduces ...

Interested in reading more?

Become a Member of

The Scientist Logo
Receive full access to digital editions of The Scientist, as well as TS Digest, feature stories, more than 35 years of archives, and much more!
Already a member? Login Here
December digest cover image of a wooden sculpture comprised of multiple wooden neurons that form a seahorse.
December 2025, Issue 1

Wooden Neurons: An Artistic Vision of the Brain

A neurobiologist, who loves the morphology of cells, turns these shapes into works of art made from wood.

View this Issue
Stacks of cell culture dishes, plates, and flasks with pink cell culture medium on a white background.

Driving Innovation with Cell Culture Essentials

Merck
Stacks of cell culture dishes, plates, and flasks with pink cell culture medium on a white background.

Driving Innovation with Cell Culture Essentials

MilliporeSigma purple logo
Abstract wireframe sphere with colorful dots and connecting lines representing the complex cellular and molecular interactions within the tumor microenvironment.

Exploring the Inflammatory Tumor Microenvironment 

Cellecta logo
An image of a DNA sequencing spectrum with a radial blur filter applied.

A Comprehensive Guide to Next-Generation Sequencing

Integra Logo

Products

brandtech logo

BRANDTECH® Scientific Announces Strategic Partnership with Copia Scientific to Strengthen Sales and Service of the BRAND® Liquid Handling Station (LHS) 

Top Innovations 2026 Contest Image

Enter Our 2026 Top Innovations Contest

Biotium Logo

Biotium Expands Tyramide Signal Amplification Portfolio with Brighter and More Stable Dyes for Enhanced Spatial Imaging

Labvantage Logo

LabVantage Solutions Awarded $22.3 Million U.S Customs and Border Protection Contract to Deliver Next-Generation Forensic LIMS