Genome, Exome, RNA Sequencing Applied to Pediatric Cancer Cases

Combining data from the genetic testing techniques can guide patient care, scientists say.

Written byAshley Yeager
| 2 min read

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Performing three types of genetic testing on patients with pediatric cancers can improve their care, researchers reported yesterday (October 17) at the American Society of Human Genetics annual meeting in San Diego.

Scott Newman, a cancer biologist at St. Jude Children’s Research Hospital, and his colleagues performed whole genome, exome, and RNA sequencing on tumors from 253 pediatric oncology patients, as well as whole genome and exome sequencing on healthy tissue samples from the same children. “It is a whole lot of sequencing. I admit that,” Newman said during his presentation of the project, called Genomes for Kids. Yet, the data revealed at least one insightful result—either a diagnosis, a potential drug target, or a prognosis—for nearly 200 of the patients.

The testing comes at a cost—$8,600 per patient. That may seem high, Newman ...

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  • Ashley started at The Scientist in 2018. Before joining the staff, she worked as a freelance editor and writer, a writer at the Simons Foundation, and a web producer at Science News, among other positions. She holds a bachelor’s degree in journalism from the University of Tennessee, Knoxville, and a master’s degree in science writing from MIT. Ashley edits the Scientist to Watch and Profile sections of the magazine and writes news, features, and other stories for both online and print.

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