Opinion: Learning from Transcriptomes

In the largest microbial eukaryote genetic sequencing effort ever attempted, researchers are investigating the transcriptomes of 700 marine algae species.

| 2 min read

Register for free to listen to this article
Listen with Speechify
0:00
2:00
Share

Lotharella globosa, one of the species getting sequencedYoshihisa HirakawaGet your bioinformatic boots on because the National Center for Genome Research (NCGR), in collaboration with the Gordon and Betty Moore Foundation and the international scientific community, is sequencing the transcriptomes from hundreds of the planet's most bizarre and fascinating marine algae. The results from this project, which is to be the largest of its kind ever attempted, will illuminate marine microbial diversity and its pivotal role in shaping ocean ecosystems and the air we breathe.

After receiving nominations from researchers around the world, the NCGR and the Marine Microbial Initiative advisory committee have selected 700 algae, spanning 200 genera, for transcriptome sequencing. Many of the algae that made the list are ultra-tiny species called picoplankton, which are ubiquitous throughout the Earth’s oceans and as important as the rain forests in absorbing carbon dioxide from the atmosphere. Various harmful algae have also been chosen, including species that cause red tides and those that produce a neurotoxin responsible for shellfish poisoning. Symbiotic algae are in the mix as well, like those that reside within corals and sea anemones and form the photosynthetic engine of the Great Barrier Reef. Even a few non-photosynthetic microbes made it into the sequencing pipeline, such as algal-eating ...

Interested in reading more?

Become a Member of

The Scientist Logo
Receive full access to more than 35 years of archives, as well as TS Digest, digital editions of The Scientist, feature stories, and much more!
Already a member? Login Here

Keywords

Meet the Author

  • David Smith

    This person does not yet have a bio.
Share
Image of a woman in a microbiology lab whose hair is caught on fire from a Bunsen burner.
April 1, 2025, Issue 1

Bunsen Burners and Bad Hair Days

Lab safety rules dictate that one must tie back long hair. Rosemarie Hansen learned the hard way when an open flame turned her locks into a lesson.

View this Issue
Conceptual image of biochemical laboratory sample preparation showing glassware and chemical formulas in the foreground and a scientist holding a pipette in the background.

Taking the Guesswork Out of Quality Control Standards

sartorius logo
An illustration of PFAS bubbles in front of a blue sky with clouds.

PFAS: The Forever Chemicals

sartorius logo
Unlocking the Unattainable in Gene Construction

Unlocking the Unattainable in Gene Construction

dna-script-primarylogo-digital
Concept illustration of acoustic waves and ripples.

Comparing Analytical Solutions for High-Throughput Drug Discovery

sciex

Products

Green Cooling

Thermo Scientific™ Centrifuges with GreenCool Technology

Thermo Fisher Logo
Singleron Avatar

Singleron Biotechnologies and Hamilton Bonaduz AG Announce the Launch of Tensor to Advance Single Cell Sequencing Automation

Zymo Research Logo

Zymo Research Launches Research Grant to Empower Mapping the RNome

Magid Haddouchi, PhD, CCO

Cytosurge Appoints Magid Haddouchi as Chief Commercial Officer