Small Molecule Superstore

An analysis of bacterial sequences from the Human Microbiome Project has uncovered thousands of biosynthetic gene clusters.

| 2 min read

Register for free to listen to this article
Listen with Speechify
0:00
2:00
Share

Lactobacillus bacteria and a vaginal epithelial cell.CDC, JANICE CARR

The microbes that inhabit the human body may be an untapped source of antibiotics and other drug molecules, according to an analysis published last week (September 11) in Cell. A team of researchers has mined data from the Human Microbiome Project for clusters of genes involved in the synthesis of small molecule natural products.

Using a machine-learning approach, the researchers first trained a software program on 732 known gene clusters for the synthesis of natural products. They applied this program to sequence data from the Human Microbiome Project—more than 2,000 genomes from bacteria found at five body sites on 242 people. This yielded a database of 3,118 gene clusters that were widely present in healthy people.

Because the throngs of bacteria in the body engage ...

Interested in reading more?

Become a Member of

The Scientist Logo
Receive full access to more than 35 years of archives, as well as TS Digest, digital editions of The Scientist, feature stories, and much more!
Already a member? Login Here

Keywords

Meet the Author

  • Molly Sharlach

    This person does not yet have a bio.
Share
Image of a woman in a microbiology lab whose hair is caught on fire from a Bunsen burner.
April 1, 2025, Issue 1

Bunsen Burners and Bad Hair Days

Lab safety rules dictate that one must tie back long hair. Rosemarie Hansen learned the hard way when an open flame turned her locks into a lesson.

View this Issue
Faster Fluid Measurements for Formulation Development

Meet Honeybun and Breeze Through Viscometry in Formulation Development

Unchained Labs
Conceptual image of biochemical laboratory sample preparation showing glassware and chemical formulas in the foreground and a scientist holding a pipette in the background.

Taking the Guesswork Out of Quality Control Standards

sartorius logo
An illustration of PFAS bubbles in front of a blue sky with clouds.

PFAS: The Forever Chemicals

sartorius logo
Unlocking the Unattainable in Gene Construction

Unlocking the Unattainable in Gene Construction

dna-script-primarylogo-digital

Products

Metrion Biosciences Logo

Metrion Biosciences launches NaV1.9 high-throughput screening assay to strengthen screening portfolio and advance research on new medicines for pain

Biotium Logo

Biotium Unveils New Assay Kit with Exceptional RNase Detection Sensitivity

Atelerix

Atelerix signs exclusive agreement with MineBio to establish distribution channel for non-cryogenic cell preservation solutions in China

Green Cooling

Thermo Scientific™ Centrifuges with GreenCool Technology

Thermo Fisher Logo